Jekyll2023-04-29T13:31:03+00:00/CShaperPage/feed.xmlCShaperCShaper depository for public code and dataCShaperApp comes with CShaper2023-04-17T10:25:49+00:002023-04-17T10:25:49+00:00/CShaperPage/cshaper/update/2023/04/17/cshaperapp<p>CShaper now has been deployed as a desktop software with user-friendly GUI and extensible framework. You may use
pretrained model to process your own data or even retrain the model with your annotation. To get more detail and
try the app, please visit the <a href="https://github.com/cao13jf/CShaperApp">CShaperApp</a>!</p>
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</div>CShaper now has been deployed as a desktop software with user-friendly GUI and extensible framework. You may use pretrained model to process your own data or even retrain the model with your annotation. To get more detail and try the app, please visit the CShaperApp!CShaper is published by Nature Communications2020-12-07T10:25:49+00:002020-12-07T10:25:49+00:00/CShaperPage/cshaper/update/2020/12/07/online-paper<p>Our paper <strong>Establishment of a morphological atlas of the <em>Caenorhabditis elegans</em> embryo using deep-learning-based 4D
segmentation</strong> is published at <em>Nature Communications</em>. Check it <a href="https://www.nature.com/articles/s41467-020-19863-x">here</a></p>
<p><img src="images/NatureComm.png" alt="Published paper" /></p>Our paper Establishment of a morphological atlas of the Caenorhabditis elegans embryo using deep-learning-based 4D segmentation is published at Nature Communications. Check it hereWelcome to CShaper!2020-02-27T01:25:49+00:002020-02-27T01:25:49+00:00/CShaperPage/cshaper/update/2020/02/27/welcome-to-CShaper<p>CShaper is publicly available now! It provides a complete framework for analysizing cellular shape of <em>C. elegans</em>
embryos at single-cell level.</p>CShaper is publicly available now! It provides a complete framework for analysizing cellular shape of C. elegans embryos at single-cell level.